EHD3

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
EHD3 EH-Domain Containing 3, PAST3, PAST Homolog 3 EH-domain containing 3 NM_014600 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens EH-domain containing 3 (EHD3), mRNA.

Low expression in human cells, constitutive expression in bat cells.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome5 8 5 9 6 6 6 6 6
Read_Max
batR. aegyptiacusTranscriptome 201 172 112 134 125 134 126 156 172
Read_Max
bat_genomeR. aegyptiacusGenome 0 1 2 0 1 0 0 0 0
DESeq
humanH. sapiensGenome 36.52 70.35 51.63 39.78 55.47 8.9 52.76 34.57 55.37
DESeq
batR. aegyptiacusTranscriptome 1534.26 1532.27 1220.09 1301.25 1243.93 1300.86 1238.0 1266.75 1353.3
DESeq
bat_genomeR. aegyptiacusGenome 0.0 1.83 4.46 0.0 1.12 0.0 0.0 0.0 0.0

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 36.52 39.78 52.76 0.12 0.53 0.41
7h 70.35 55.47 34.57 -0.34 -1.03 -0.68
23h 51.63 8.9 55.37 -2.54 0.1 2.64

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 36.52 70.35 51.63 0.95 0.5 -0.45
Ebov 39.78 55.47 8.9 0.48 -2.16 -2.64
Marv 52.76 34.57 55.37 -0.61 0.07 0.68

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1534.26 1301.25 1238.0 -0.24 -0.31 -0.07
7h 1532.27 1243.93 1266.75 -0.3 -0.27 0.03
23h 1220.09 1300.86 1353.3 0.09 0.15 0.06

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1534.26 1532.27 1220.09 -0.0 -0.33 -0.33
Ebov 1301.25 1243.93 1300.86 -0.06 -0.0 0.06
Marv 1238.0 1266.75 1353.3 0.03 0.13 0.1