RNF41
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| RNF41 | FLRF, NRDP1,SBBI03 | ring finger protein 41, E3 ubiquitin protein ligase | NM_005785 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene encodes an E3 ubiquitin ligase. The encoded protein plays a role in type 1 cytokine receptor signaling by controlling the balance between JAK2-associated cytokine receptor degradation and ectodomain shedding. Alternative splicing results in multiple transcript variants.
The gene RNF41 is weakly expressed in human cells and moderately expressed in bat cells datasets, without significant changes in expression profiles.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 169 | 144 | 109 | 149 | 190 | 117 | 217 | 211 | 136 |
Read_Max |  | R. aegyptiacus | Transcriptome | 180 | 149 | 175 | 155 | 117 | 161 | 118 | 185 | 132 |
Read_Max |  | R. aegyptiacus | Genome | 193 | 149 | 149 | 160 | 133 | 110 | 124 | 227 | 227 |
DESeq | | H. sapiens | Genome | 1871.25 | 1850.03 | 1690.79 | 1908.22 | 1929.32 | 1457.73 | 1893.13 | 1886.67 | 2248.55 |
DESeq | | R. aegyptiacus | Transcriptome | 710.08 | 646.37 | 876.84 | 618.16 | 667.91 | 724.71 | 658.43 | 668.58 | 631.67 |
DESeq | | R. aegyptiacus | Genome | 2009.25 | 1703.07 | 2234.9 | 1948.31 | 1913.05 | 2465.92 | 1850.98 | 1850.74 | 2026.61 |