SMAP1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| SMAP1 | FLJ13159, SMAP-1 | small ArfGAP 1 | NM_001044305 |  |
NONE |  |
 |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
The protein encoded by this gene is similar to the mouse stromal membrane-associated protein-1. This similarity suggests that this human gene product is also a type II membrane glycoprotein involved in the erythropoietic stimulatory activity of stromal cells. Alternate splicing results in multiple transcript variants encoding different isoforms.
The gene SMAP1 is moderately expressed in human cells and bat cells datasets without significant changes in expression profiles.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 145 | 138 | 100 | 145 | 178 | 188 | 161 | 170 | 94 |
Read_Max |  | R. aegyptiacus | Transcriptome | 246 | 206 | 153 | 166 | 157 | 212 | 211 | 196 | 208 |
Read_Max |  | R. aegyptiacus | Genome | 279 | 209 | 137 | 204 | 148 | 127 | 184 | 270 | 250 |
DESeq | | H. sapiens | Genome | 1752.52 | 1405.36 | 1201.32 | 1592.25 | 1448.05 | 1676.17 | 1587.86 | 1338.31 | 1304.73 |
DESeq | | R. aegyptiacus | Transcriptome | 1773.7 | 1653.0 | 1471.73 | 1421.2 | 1479.37 | 1855.2 | 1836.47 | 1377.46 | 1601.72 |
DESeq | | R. aegyptiacus | Genome | 3829.44 | 3731.97 | 3475.65 | 3463.1 | 3712.26 | 3647.32 | 4154.02 | 3820.41 | 3440.18 |