RAB11FIP2

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
RAB11FIP2	NRip11,KIAA0941, nRip11, Rab11-FIP2	RAB11 family interacting protein 2 (class I)	NM_014904	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

RAB11FIP2 (RAB11 family interacting protein 2 (class I)) is a protein-coding gene. GO annotations related to this gene include protein kinase binding and protein homodimerization activity. An important paralog of this gene is RAB11FIP1.

The gene RAB11FIP2 is expressed in all human cells and bat cells datasets, however it is significantly downregulated in human cells late Ebola datasets while it remains stable expressed in bat cells.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source	Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max	H. sapiens	Genome	80	77	79	83	98	44	171	85	82
Read_Max	R. aegyptiacus	Transcriptome	116	92	93	124	103	149	113	130	95
Read_Max	R. aegyptiacus	Genome	142	144	80	99	95	90	104	172	128
DESeq	H. sapiens	Genome	1389.23	1177.93	1300.61	1427.99	1285.46	652.38	1375.58	1075.33	1566.78
DESeq	R. aegyptiacus	Transcriptome	636.99	518.38	641.09	621.82	592.35	678.52	670.67	632.22	540.7
DESeq	R. aegyptiacus	Genome	1726.51	1863.7	1558.74	1525.66	1746.75	1856.29	1829.61	1799.19	1524.02

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1389.23	1427.99	1375.58	0.04	-0.01	-0.05
7h	1177.93	1285.46	1075.33	0.13	-0.13	-0.26
23h	1300.61	652.38	1566.78	-1.0	0.27	1.26

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1389.23	1177.93	1300.61	-0.24	-0.1	0.14
Ebov	1427.99	1285.46	652.38	-0.15	-1.13	-0.98
Marv	1375.58	1075.33	1566.78	-0.36	0.19	0.54

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	636.99	621.82	670.67	-0.03	0.07	0.11
7h	518.38	592.35	632.22	0.19	0.29	0.09
23h	641.09	678.52	540.7	0.08	-0.25	-0.33

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	636.99	518.38	641.09	-0.3	0.01	0.31
Ebov	621.82	592.35	678.52	-0.07	0.13	0.2
Marv	670.67	632.22	540.7	-0.09	-0.31	-0.23

Differential transcriptional responses to Ebola and Marburg virus infection in cells from bats and humans

Supplemental Material