AGAP1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
AGAP1 ArfGAP With GTPase Domain, Ankyrin Repeat And PH Domain 1, CENTG2,KIAA1099, GGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 NM_014914 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

This gene encodes a member of an ADP-ribosylation factor GTPase-activating protein family involved in membrane trafficking and cytoskeleton dynamics. This gene functions as a direct regulator of the adaptor-related protein complex 3 on endosomes. Multiple transcript variants encoding different isoforms have been found for this gene.

This gene is expressed in all samples.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome49 52 42 49 64 67 48 69 49
Read_Max
batR. aegyptiacusTranscriptome 220 181 108 154 118 173 181 171 210
Read_Max
bat_genomeR. aegyptiacusGenome 271 162 98 197 119 101 174 206 223
DESeq
humanH. sapiensGenome 1029.99 1047.39 940.21 926.09 965.16 1097.16 843.12 908.26 952.43
DESeq
batR. aegyptiacusTranscriptome 1922.4 1847.24 1319.04 1486.21 1612.97 1780.77 2162.41 1476.61 1699.68
DESeq
bat_genomeR. aegyptiacusGenome 2868.64 2149.37 2219.28 2921.96 2401.92 2597.77 3019.37 2062.45 2453.85

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1029.99 926.09 843.12 -0.15 -0.29 -0.14
7h 1047.39 965.16 908.26 -0.12 -0.21 -0.09
23h 940.21 1097.16 952.43 0.22 0.02 -0.2

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1029.99 1047.39 940.21 0.02 -0.13 -0.16
Ebov 926.09 965.16 1097.16 0.06 0.24 0.18
Marv 843.12 908.26 952.43 0.11 0.18 0.07

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1922.4 1486.21 2162.41 -0.37 0.17 0.54
7h 1847.24 1612.97 1476.61 -0.2 -0.32 -0.13
23h 1319.04 1780.77 1699.68 0.43 0.37 -0.07

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1922.4 1847.24 1319.04 -0.06 -0.54 -0.49
Ebov 1486.21 1612.97 1780.77 0.12 0.26 0.14
Marv 2162.41 1476.61 1699.68 -0.55 -0.35 0.2