CC2D2A

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
CC2D2A JBTS9, MKS6,KIAA1345, JBTS9 coiled-coil and C2 domain containing 2A NM_001080522 pdf NONE

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Description

This gene encodes a coiled-coil and calcium binding domain protein that appears to play a critical role in cilia formation. Mutations in this gene cause Meckel syndrome type 6, as well as Joubert syndrome type 9. Alternative splicing results in multiple transcript variants.

This gene is not differentially expressed. %%%%%%%%%%%%%%%%%%%%%

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome42 40 42 43 46 47 42 61 39
Read_Max
batR. aegyptiacusTranscriptome 84 60 63 78 54 50 45 82 74
Read_Max
bat_genomeR. aegyptiacusGenome 86 89 52 58 56 34 47 103 85
DESeq
humanH. sapiensGenome 1002.59 988.24 898.51 999.1 1064.34 1248.49 942.24 914.66 1124.23
DESeq
batR. aegyptiacusTranscriptome 1029.33 900.52 1249.41 955.13 929.64 967.24 846.43 1040.37 1090.89
DESeq
bat_genomeR. aegyptiacusGenome 1709.33 1554.3 1988.32 1615.52 1527.99 1661.79 1414.66 1646.95 1771.46

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1002.59 999.1 942.24 -0.01 -0.09 -0.08
7h 988.24 1064.34 914.66 0.11 -0.11 -0.22
23h 898.51 1248.49 1124.23 0.47 0.32 -0.15

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1002.59 988.24 898.51 -0.02 -0.16 -0.14
Ebov 999.1 1064.34 1248.49 0.09 0.32 0.23
Marv 942.24 914.66 1124.23 -0.04 0.25 0.3

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1029.33 955.13 846.43 -0.11 -0.28 -0.17
7h 900.52 929.64 1040.37 0.05 0.21 0.16
23h 1249.41 967.24 1090.89 -0.37 -0.2 0.17

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1029.33 900.52 1249.41 -0.19 0.28 0.47
Ebov 955.13 929.64 967.24 -0.04 0.02 0.06
Marv 846.43 1040.37 1090.89 0.3 0.37 0.07