PIP5K1A

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha NM_003557 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens phosphatidylinositol-4-phosphate 5-kinase, type I, alpha(PIP5K1A), transcript variant 1, mRNA.

The gene is 2-fold upregulated in human cells 23 h after Ebolainfection and downregulated 23 h after Marburg infection. The bat cells homologis not expressed without any significant changes.}

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome488 554 317 483 461 1111 633 643 324
Read_Max
batR. aegyptiacusTranscriptome 164 126 123 171 140 246 122 200 184
Read_Max
bat_genomeR. aegyptiacusGenome 194 174 125 139 154 154 107 252 211
DESeq
humanH. sapiensGenome 5242.37 4806.64 4184.76 5270.96 4889.27 12270.66 5468.62 4892.23 4176.41
DESeq
batR. aegyptiacusTranscriptome 1200.72 1125.63 1345.91 1280.19 1284.45 2014.31 1154.57 1403.08 1307.81
DESeq
bat_genomeR. aegyptiacusGenome 2782.71 2730.75 3155.42 2573.38 2673.14 4395.32 2545.94 2879.19 2815.16

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 5242.37 5270.96 5468.62 0.01 0.06 0.05
7h 4806.64 4889.27 4892.23 0.02 0.03 0.0
23h 4184.76 12270.66 4176.41 1.55 -0.0 -1.55

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 5242.37 4806.64 4184.76 -0.13 -0.33 -0.2
Ebov 5270.96 4889.27 12270.66 -0.11 1.22 1.33
Marv 5468.62 4892.23 4176.41 -0.16 -0.39 -0.23

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1200.72 1280.19 1154.57 0.09 -0.06 -0.15
7h 1125.63 1284.45 1403.08 0.19 0.32 0.13
23h 1345.91 2014.31 1307.81 0.58 -0.04 -0.62

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1200.72 1125.63 1345.91 -0.09 0.16 0.26
Ebov 1280.19 1284.45 2014.31 0.0 0.65 0.65
Marv 1154.57 1403.08 1307.81 0.28 0.18 -0.1