CHMP2A

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
CHMP2A	BC-2, BC2, CHMP2, VPS2, VPS2A	charged multivesicular body protein 2A	NM_014453	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	51	34	39	29	53	60	44	54	29
Read_Max		R. aegyptiacus	Transcriptome	162	178	146	116	116	170	93	133	188
Read_Max		R. aegyptiacus	Genome	183	126	129	172	100	100	80	163	217
DESeq		H. sapiens	Genome	208.02	187.64	157.87	172.1	205.05	387.88	200.13	232.81	146.7
DESeq		R. aegyptiacus	Transcriptome	525.25	640.92	705.83	455.17	467.51	629.76	390.34	414.93	573.06
DESeq		R. aegyptiacus	Genome	663.45	604.2	897.09	837.39	652.94	819.8	501.54	555.06	763.72

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	208.02	172.1	200.13	-0.27	-0.06	0.22
7h	187.64	205.05	232.81	0.13	0.31	0.18
23h	157.87	387.88	146.7	1.3	-0.11	-1.4

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	208.02	187.64	157.87	-0.15	-0.4	-0.25
Ebov	172.1	205.05	387.88	0.25	1.17	0.92
Marv	200.13	232.81	146.7	0.22	-0.45	-0.67

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	525.25	455.17	390.34	-0.21	-0.43	-0.22
7h	640.92	467.51	414.93	-0.46	-0.63	-0.17
23h	705.83	629.76	573.06	-0.16	-0.3	-0.14

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	525.25	640.92	705.83	0.29	0.43	0.14
Ebov	455.17	467.51	629.76	0.04	0.47	0.43
Marv	390.34	414.93	573.06	0.09	0.55	0.47