EIF4A2

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
EIF4A2	BM-010, DDX2B, EIF4A, EIF4F, eIF-4A-II, eIF4A-II,DDX2B, BM-010	eukaryotic translation initiation factor 4A2	NM_001967	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The eukaryotic translation initiation factor 4A2 is involved in RNA transport. It seems to be slightly upregulated in the first 3 hours of Ebola infection in humans, and in the first 3 hours of Marburg infection in bats.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	495	675	753	488	938	1469	678	841	525
Read_Max		R. aegyptiacus	Transcriptome	348	269	410	495	334	252	234	444	304
Read_Max		R. aegyptiacus	Genome	623	845	531	388	426	302	348	936	624
DESeq		H. sapiens	Genome	4942.0	6195.71	6830.64	5118.1	6685.89	11075.8	5384.41	5471.75	5404.03
DESeq		R. aegyptiacus	Transcriptome	1251.97	1131.07	2204.65	2107.95	1630.49	1519.0	1241.33	1853.36	1466.14
DESeq		R. aegyptiacus	Genome	5083.29	7825.36	7573.9	4635.25	6396.56	5747.72	5164.98	7229.29	5825.53

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	4942.0	5118.1	5384.41	0.05	0.12	0.07
7h	6195.71	6685.89	5471.75	0.11	-0.18	-0.29
23h	6830.64	11075.8	5404.03	0.7	-0.34	-1.04

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	4942.0	6195.71	6830.64	0.33	0.47	0.14
Ebov	5118.1	6685.89	11075.8	0.39	1.11	0.73
Marv	5384.41	5471.75	5404.03	0.02	0.01	-0.02

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1251.97	2107.95	1241.33	0.75	-0.01	-0.76
7h	1131.07	1630.49	1853.36	0.53	0.71	0.18
23h	2204.65	1519.0	1466.14	-0.54	-0.59	-0.05

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1251.97	1131.07	2204.65	-0.15	0.82	0.96
Ebov	2107.95	1630.49	1519.0	-0.37	-0.47	-0.1
Marv	1241.33	1853.36	1466.14	0.58	0.24	-0.34