ADRBK2

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
ADRBK2 BARK2, GRK3,GRK3, BARK2 adrenergic, beta, receptor kinase 2 NM_005160 pdf NONE

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Description

The beta-adrenergic receptor kinase specifically phosphorylates the agonist-occupied form of the beta-adrenergic and related G protein-coupled receptors. Overall, the beta adrenergic receptor kinase 2 has 85\% amino acid similarity with beta adrenergic receptor kinase 1, with the protein kinase catalytic domain having 95\% similarity. These data suggest the existence of a family of receptor kinases which may serve broadly to regulate receptor function. Gene contains a YES1 pseudogene that carries many wrongly assigned reads. The gene is upregulated in human MARV 23h.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome221 200 184 204 265 278 196 233 182
Read_Max
batR. aegyptiacusTranscriptome 6 5 5 7 11 7 5 7 11
Read_Max
bat_genomeR. aegyptiacusGenome 8 8 9 11 6 5 6 9 12
DESeq
humanH. sapiensGenome 1343.56 1280.94 1335.36 1218.11 1248.07 1151.12 1165.05 1175.25 2631.29
DESeq
batR. aegyptiacusTranscriptome 18.64 16.43 29.1 29.39 32.76 26.66 19.91 24.13 39.49
DESeq
bat_genomeR. aegyptiacusGenome 58.44 67.54 81.45 67.15 59.16 66.58 67.47 68.99 88.19

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1343.56 1218.11 1165.05 -0.14 -0.21 -0.06
7h 1280.94 1248.07 1175.25 -0.04 -0.12 -0.09
23h 1335.36 1151.12 2631.29 -0.21 0.98 1.19

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1343.56 1280.94 1335.36 -0.07 -0.01 0.06
Ebov 1218.11 1248.07 1151.12 0.04 -0.08 -0.12
Marv 1165.05 1175.25 2631.29 0.01 1.18 1.16

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 18.64 29.39 19.91 0.66 0.1 -0.56
7h 16.43 32.76 24.13 1.0 0.55 -0.44
23h 29.1 26.66 39.49 -0.13 0.44 0.57

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 18.64 16.43 29.1 -0.18 0.64 0.82
Ebov 29.39 32.76 26.66 0.16 -0.14 -0.3
Marv 19.91 24.13 39.49 0.28 0.99 0.71