AHI1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
AHI1 Jouberin, ORF1, JBTS3,FLJ20069 Abelson helper integration site 1 NM_017651 pdf NONE

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Description

The gene AHI1 is weakly expressed in all datasets of human and bat, without significant changes in expression profiles. This gene is apparently required for both cerebellar and cortical development in humans. This gene mutations cause specific forms of Joubert syndrome-related disorders. Joubert syndrome (JS) is a recessively inherited developmental brain disorder with several identified causative chromosomal loci. Alternatively spliced transcript variants encoding different isoforms have been identified. (provided by RefSeq, Oct 2008)

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome64 68 77 47 81 114 62 94 49
Read_Max
batR. aegyptiacusTranscriptome 82 54 63 81 70 108 50 79 72
Read_Max
bat_genomeR. aegyptiacusGenome 113 119 71 66 95 72 73 153 95
DESeq
humanH. sapiensGenome 960.99 1158.56 1289.69 887.31 1216.36 1777.49 972.94 1059.34 1123.14
DESeq
batR. aegyptiacusTranscriptome 745.36 523.83 816.99 824.19 823.41 1281.62 797.48 733.85 839.85
DESeq
bat_genomeR. aegyptiacusGenome 1195.41 1421.96 1501.84 1012.17 1607.23 2066.46 1475.39 1415.41 1467.51

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 960.99 887.31 972.94 -0.12 0.02 0.13
7h 1158.56 1216.36 1059.34 0.07 -0.13 -0.2
23h 1289.69 1777.49 1123.14 0.46 -0.2 -0.66

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 960.99 1158.56 1289.69 0.27 0.42 0.15
Ebov 887.31 1216.36 1777.49 0.46 1.0 0.55
Marv 972.94 1059.34 1123.14 0.12 0.21 0.08

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 745.36 824.19 797.48 0.15 0.1 -0.05
7h 523.83 823.41 733.85 0.65 0.49 -0.17
23h 816.99 1281.62 839.85 0.65 0.04 -0.61

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 745.36 523.83 816.99 -0.51 0.13 0.64
Ebov 824.19 823.41 1281.62 -0.0 0.64 0.64
Marv 797.48 733.85 839.85 -0.12 0.07 0.19