RAB11B
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| RAB11B | H-YPT3 | RAB11B, member RAS oncogene family | NM_004218 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
The Ras superfamily of small GTP-binding proteins, which includes the Ras (see MIM 190020), Ral (see MIM 179550), Rho (see MIM 165390), Rap (see MIM 179520), and Rab (see MIM 179508) families, is involved in controlling a diverse set of essential cellular functions. The Rab family, including RAB11B, appears to play a critical role in regulating exocytotic and endocytotic pathways. Gene is 2-fold downregulated in MARV 23h. In contrast, the bat homolog is upregulated in MARV23 only.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 68 | 65 | 50 | 77 | 59 | 60 | 115 | 120 | 44 |
Read_Max |  | R. aegyptiacus | Transcriptome | 294 | 266 | 254 | 248 | 198 | 196 | 171 | 255 | 352 |
Read_Max |  | R. aegyptiacus | Genome | 318 | 252 | 204 | 252 | 170 | 116 | 143 | 301 | 378 |
DESeq | | H. sapiens | Genome | 670.76 | 640.46 | 455.71 | 696.82 | 463.57 | 476.05 | 691.36 | 672.45 | 476.17 |
DESeq | | R. aegyptiacus | Transcriptome | 1083.1 | 1144.69 | 1264.07 | 1083.32 | 1026.0 | 874.85 | 956.56 | 993.28 | 1412.78 |
DESeq | | R. aegyptiacus | Genome | 2274.81 | 1861.88 | 2236.02 | 2294.91 | 2058.15 | 1968.56 | 2050.02 | 1761.93 | 2548.03 |