NCK2
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| NCK2 | GRB4, SH2/SH3 Adaptor Protein NCK-Beta,NCKbeta | NCK adaptor protein 2 | NM_003581 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
Homo sapiens NCK adaptor protein 2 (NCK2), transcript variant 1, mRNA. This gene encodes a member of the NCK family of adaptor proteins. The protein contains three SH3 domains and one SH2 domain. The protein has no known catalytic function but has been shown to bind and recruit various proteins involved in the regulation of receptor protein tyrosine kinases. It is through these regulatory activities that this protein is believed to be involved in cytoskeletal reorganization. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. [provided by RefSeq, Jul 2008].
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 42 | 52 | 44 | 37 | 53 | 94 | 57 | 72 | 52 |
Read_Max |  | R. aegyptiacus | Transcriptome | 166 | 207 | 150 | 168 | 169 | 216 | 150 | 158 | 273 |
Read_Max |  | R. aegyptiacus | Genome | 176 | 182 | 134 | 181 | 139 | 126 | 130 | 201 | 304 |
DESeq | | H. sapiens | Genome | 472.88 | 484.42 | 467.63 | 461.84 | 467.63 | 678.7 | 445.74 | 491.8 | 576.21 |
DESeq | | R. aegyptiacus | Transcriptome | 973.04 | 999.46 | 936.7 | 846.16 | 1029.29 | 1258.52 | 896.49 | 864.39 | 1373.42 |
DESeq | | R. aegyptiacus | Genome | 1838.24 | 1732.28 | 1863.35 | 1971.02 | 1985.6 | 2378.46 | 1954.44 | 1664.39 | 2577.99 |