LPIN3

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
LPIN3	LIPN3L,SMP2	lipin 3	NM_022896	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens lipin 3 (LPIN3), mRNA.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	14	25	26	18	22	26	20	33	23
Read_Max		R. aegyptiacus	Transcriptome	13	10	16	8	8	14	9	14	28
Read_Max		R. aegyptiacus	Genome	33	34	32	23	22	24	15	49	58
DESeq		H. sapiens	Genome	274.99	442.6	407.07	376.28	348.94	245.76	318.55	497.4	479.43
DESeq		R. aegyptiacus	Transcriptome	33.77	31.86	76.74	33.05	40.42	60.03	31.03	40.66	72.73
DESeq		R. aegyptiacus	Genome	462.35	546.7	856.92	448.32	601.6	911.18	372.22	643.08	1002.6

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	274.99	376.28	318.55	0.45	0.21	-0.24
7h	442.6	348.94	497.4	-0.34	0.17	0.51
23h	407.07	245.76	479.43	-0.73	0.24	0.96

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	274.99	442.6	407.07	0.69	0.57	-0.12
Ebov	376.28	348.94	245.76	-0.11	-0.61	-0.51
Marv	318.55	497.4	479.43	0.64	0.59	-0.05

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	33.77	33.05	31.03	-0.03	-0.12	-0.09
7h	31.86	40.42	40.66	0.34	0.35	0.01
23h	76.74	60.03	72.73	-0.35	-0.08	0.28

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	33.77	31.86	76.74	-0.08	1.18	1.27
Ebov	33.05	40.42	60.03	0.29	0.86	0.57
Marv	31.03	40.66	72.73	0.39	1.23	0.84