HSPA8
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| HSPA8 | Heat Shock 70kDa Protein 8, NIP71, HSP73,HSC71, HSC70 | heat shock 70kDa protein 8 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene encodes a member of the heat shock protein 70 family, which contains both heat-inducible and constitutively expressed members. This protein belongs to the latter group, which are also referred to as heat-shock cognate proteins. It functions as a chaperone, and binds to nascent polypeptides to facilitate correct folding. It also functions as an ATPase in the disassembly of clathrin-coated vesicles during transport of membrane components through the cell. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. Very high expression in all samples.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 3641 | 5559 | 4886 | 3326 | 7681 | 10762 | 4137 | 7031 | 5003 |
Read_Max |  | R. aegyptiacus | Transcriptome | NA | NA | NA | NA | NA | NA | NA | NA | NA |
Read_Max |  | R. aegyptiacus | Genome | 11437 | 11244 | 4528 | 9144 | 7769 | 7628 | 6688 | 15145 | 9763 |
DESeq | | H. sapiens | Genome | 40220.05 | 56583.55 | 44648.32 | 37358.37 | 54755.67 | 87196.64 | 37706.77 | 54655.79 | 51642.37 |
DESeq | | R. aegyptiacus | Transcriptome | NA | NA | NA | NA | NA | NA | NA | NA | NA |
DESeq | | R. aegyptiacus | Genome | 82076.05 | 89380.14 | 53663.33 | 81747.84 | 91599.99 | 119536.39 | 81077.64 | 87125.73 | 65047.45 |