EEA1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
EEA1	MST105, MSTP105, ZFYVE2,ZFYVE2	early endosome antigen 1	NM_003566	pdf		NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens early endosome antigen 1 (EEA1), mRNA. The gene is uniformly expressed in human, but contains a part of a pseudogene. The bat homolog is also highly but uniformly expressed.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	924	944	795	1067	1369	673	1013	1550	665
Read_Max		R. aegyptiacus	Transcriptome	412	278	198	291	280	339	350	337	250
Read_Max		R. aegyptiacus	Genome	469	308	176	275	245	211	308	419	279
DESeq		H. sapiens	Genome	11154.52	9647.98	9502.33	10023.04	10950.63	13379.98	9352.88	8570.84	11955.29
DESeq		R. aegyptiacus	Transcriptome	7119.51	5651.37	4611.08	7008.61	7055.57	7288.19	8469.75	7097.3	5102.3
DESeq		R. aegyptiacus	Genome	8776.95	8512.61	5612.36	7399.21	9025.06	9246.22	10532.37	8475.8	6608.94

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	11154.52	10023.04	9352.88	-0.15	-0.25	-0.1
7h	9647.98	10950.63	8570.84	0.18	-0.17	-0.35
23h	9502.33	13379.98	11955.29	0.49	0.33	-0.16

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	11154.52	9647.98	9502.33	-0.21	-0.23	-0.02
Ebov	10023.04	10950.63	13379.98	0.13	0.42	0.29
Marv	9352.88	8570.84	11955.29	-0.13	0.35	0.48

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	7119.51	7008.61	8469.75	-0.02	0.25	0.27
7h	5651.37	7055.57	7097.3	0.32	0.33	0.01
23h	4611.08	7288.19	5102.3	0.66	0.15	-0.51

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	7119.51	5651.37	4611.08	-0.33	-0.63	-0.29
Ebov	7008.61	7055.57	7288.19	0.01	0.06	0.05
Marv	8469.75	7097.3	5102.3	-0.26	-0.73	-0.48