AGAP2
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| AGAP2 | PIKE,GGAP2,Cnt-g1 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 | NM_014770 |  |
NONE |  |
 |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
The gene AGAP2 is weakly expressed in bat without significant changes in expression profile.
The protein encoded by this gene belongs to the centaurin gamma-like family. It mediates anti-apoptotic effects of nerve growth factor by activating nuclear phosphoinositide 3-kinase. It is overexpressed in cancer cells, and promotes cancer cell invasion. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. (provided by RefSeq, Aug 2011)
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 3 | 4 | 4 | 2 | 5 | 8 | 5 | 3 | 9 |
Read_Max |  | R. aegyptiacus | Transcriptome | 29 | 23 | 29 | 30 | 30 | 34 | 23 | 34 | 58 |
Read_Max |  | R. aegyptiacus | Genome | 26 | 32 | 22 | 21 | 26 | 14 | 14 | 47 | 51 |
DESeq | | H. sapiens | Genome | 33.47 | 28.54 | 28.8 | 20.39 | 27.01 | 57.58 | 34.33 | 25.78 | 101.04 |
DESeq | | R. aegyptiacus | Transcriptome | 258.92 | 312.34 | 444.42 | 381.92 | 459.84 | 474.49 | 276.88 | 394.28 | 647.41 |
DESeq | | R. aegyptiacus | Genome | 340.32 | 449.04 | 536.69 | 394.01 | 511.19 | 522.16 | 323.87 | 455.94 | 752.59 |