SH3GL1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| SH3GL1 | CNSA1, EEN, SH3D2B, SH3P8,SH3P8, CNSA1, MGC111371 | SH3-domain GRB2-like 1 | NM_003025 |  |
NONE |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene encodes a member of the endophilin family of Src homology 3 domain-containing proteins. The encoded protein is involved in endocytosis and may also play a role in the cell cycle. Overexpression of this gene may play a role in leukemogenesis, and the encoded protein has been implicated in acute myeloid leukemia as a fusion partner of the myeloid-lymphoid leukemia protein. Pseudogenes of this gene are located on the long arm of chromosomes 11 and 17. The gene is upregulated in human EBOV 23h.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 158 | 135 | 110 | 151 | 147 | 231 | 162 | 201 | 137 |
Read_Max |  | R. aegyptiacus | Transcriptome | 127 | 123 | 116 | 117 | 128 | 179 | 119 | 134 | 191 |
Read_Max |  | R. aegyptiacus | Genome | 179 | 156 | 140 | 156 | 129 | 149 | 124 | 230 | 304 |
DESeq | | H. sapiens | Genome | 2068.12 | 1729.68 | 1282.74 | 1859.17 | 1576.5 | 2277.55 | 1862.43 | 1820.32 | 1595.05 |
DESeq | | R. aegyptiacus | Transcriptome | 782.33 | 833.35 | 940.36 | 657.53 | 757.71 | 1026.26 | 741.86 | 733.02 | 1073.39 |
DESeq | | R. aegyptiacus | Genome | 1518.54 | 1153.63 | 1651.35 | 1700.45 | 1359.45 | 1994.67 | 1468.64 | 1248.89 | 1869.92 |