HSPA2

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
HSPA2 heat shock 70kDa protein 2 pdf NONE

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Description

The gene HSPA2 is weakly expressed in human an bat datasets without significant changes in expression levels. HSPA2 (heat shock 70kDa protein 2) is a protein-coding gene. GO annotations related to this gene include unfolded protein binding and glycolipid binding. An important paralog of this gene is HSPA8.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome67 73 56 65 73 71 82 100 54
Read_Max
batR. aegyptiacusTranscriptome 73 74 61 98 67 83 58 119 70
Read_Max
bat_genomeR. aegyptiacusGenome 74 96 52 69 59 46 50 119 81
DESeq
humanH. sapiensGenome 564.21 742.45 580.81 624.95 627.79 647.12 642.24 769.98 639.27
DESeq
batR. aegyptiacusTranscriptome 660.51 722.61 616.65 738.11 844.22 609.23 640.63 758.63 645.66
DESeq
bat_genomeR. aegyptiacusGenome 721.89 847.88 633.76 859.11 919.69 681.42 723.07 795.32 695.23

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 564.21 624.95 642.24 0.15 0.19 0.04
7h 742.45 627.79 769.98 -0.24 0.05 0.29
23h 580.81 647.12 639.27 0.16 0.14 -0.02

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 564.21 742.45 580.81 0.4 0.04 -0.35
Ebov 624.95 627.79 647.12 0.01 0.05 0.04
Marv 642.24 769.98 639.27 0.26 -0.01 -0.27

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 660.51 738.11 640.63 0.16 -0.04 -0.2
7h 722.61 844.22 758.63 0.22 0.07 -0.15
23h 616.65 609.23 645.66 -0.02 0.07 0.08

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 660.51 722.61 616.65 0.13 -0.1 -0.23
Ebov 738.11 844.22 609.23 0.19 -0.28 -0.47
Marv 640.63 758.63 645.66 0.24 0.01 -0.23