HSPA6

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
HSPA6 heat shock 70kDa protein 6 (HSP70B') NM_002155 pdf NONE NONE NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens heat shock 70kDa protein 6 (HSP70B) (HSPA6), mRNA. No significant expression in humans detected, with the exception of a very low expression in EBOV 23h. No homolog in bat was found.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome3 4 0 4 4 10 2 6 2
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA
DESeq
humanH. sapiensGenome 6.07 13.24 1.0 12.41 5.88 49.69 4.51 20.18 8.61
DESeq
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
DESeq
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 6.07 12.41 4.51 1.03 -0.43 -1.46
7h 13.24 5.88 20.18 -1.17 0.61 1.78
23h 1.0 49.69 8.61 5.63 3.11 -2.53

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 6.07 13.24 1.0 1.13 -2.6 -3.73
Ebov 12.41 5.88 49.69 -1.08 2.0 3.08
Marv 4.51 20.18 8.61 2.16 0.93 -1.23

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h NA NA NA NA NA NA
7h NA NA NA NA NA NA
23h NA NA NA NA NA NA

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock NA NA NA NA NA NA
Ebov NA NA NA NA NA NA
Marv NA NA NA NA NA NA