PIP5K1C
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| PIP5K1C | Phosphatidylinositol-4-Phosphate 5-Kinase, Type I, Gamma, Diphosphoinositide Kinase, Human Homolog Of Mouse Phosphatidylinositol-4-Phosphate 5-Kinase ,PIP5Kgamma, KIAA0589, LCCS3 | phosphatidylinositol-4-phosphate 5-kinase, type I, gamma | NM_012398 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This locus encodes a type I phosphatidylinositol 4-phosphate 5-kinase. The encoded protein catalyzes phosphorylation of phosphatidylinositol 4-phosphate, producing phosphatidylinositol 4,5-bisphosphate. This enzyme is found at synapses and has been found to play roles in endocytosis and cell migration. Mutations at this locus have been associated with lethal congenital contractural syndrome. Alternatively spliced transcript variants encoding different isoforms have been described. Expression in all samples.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 38 | 56 | 39 | 33 | 59 | 60 | 48 | 63 | 40 |
Read_Max |  | R. aegyptiacus | Transcriptome | 61 | 50 | 46 | 65 | 58 | 70 | 30 | 65 | 89 |
Read_Max |  | R. aegyptiacus | Genome | 98 | 125 | 68 | 83 | 97 | 63 | 52 | 145 | 149 |
DESeq | | H. sapiens | Genome | 1029.99 | 1141.22 | 978.93 | 1009.36 | 1140.76 | 1260.34 | 944.0 | 1238.39 | 1029.63 |
DESeq | | R. aegyptiacus | Transcriptome | 363.1 | 355.0 | 438.31 | 447.85 | 429.18 | 488.61 | 316.92 | 414.93 | 420.86 |
DESeq | | R. aegyptiacus | Genome | 2093.47 | 2353.81 | 2284.0 | 2102.35 | 2574.92 | 2651.29 | 1852.1 | 2319.37 | 2396.48 |