RUFY1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| RUFY1 | RABIP4,FLJ22251, ZFYVE12, RABIP4 | RUN and FYVE domain containing 1 | NM_001040451 |  |
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NONE |  |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
The fene RUFY1 is weakly expressed in human and bat datasets but without significant changes in expression levels. This gene encodes a protein that contains a RUN domain and a FYVE-type zinc finger domain. The encoded protein binds to phosphatidylinositol-3-phosphate (PI3P) and plays a role in early endosomal trafficking, tethering and fusion through interactions with small GTPases including Rab4, Rab5 and Rab14. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. (provided by RefSeq, Dec 2011)
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 47 | 76 | 54 | 55 | 68 | 154 | 55 | 93 | 50 |
Read_Max |  | R. aegyptiacus | Transcriptome | 63 | 80 | 61 | 58 | 54 | 101 | 64 | 69 | 81 |
Read_Max |  | R. aegyptiacus | Genome | 63 | 46 | 45 | 67 | 42 | 49 | 46 | 83 | 74 |
DESeq | | H. sapiens | Genome | 734.69 | 944.38 | 864.76 | 809.74 | 791.19 | 2064.37 | 725.57 | 897.07 | 783.89 |
DESeq | | R. aegyptiacus | Transcriptome | 649.59 | 768.91 | 532.37 | 578.79 | 658.05 | 854.32 | 665.11 | 606.61 | 650.91 |
DESeq | | R. aegyptiacus | Genome | 743.37 | 674.47 | 685.09 | 892.69 | 748.93 | 932.06 | 778.18 | 708.1 | 733.76 |