NUP93

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
NUP93 NIC96,KIAA0095 nucleoporin 93kDa NM_014669 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The nucleoporin 93kDa is involved in RNA transport. It does not present any particular diffential expression pattern in the analyzed samples.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome187 248 244 221 276 247 294 385 172
Read_Max
batR. aegyptiacusTranscriptome 312 313 238 222 232 268 258 280 307
Read_Max
bat_genomeR. aegyptiacusGenome 357 211 167 303 174 140 227 363 329
DESeq
humanH. sapiensGenome 2700.33 2854.6 2332.15 2988.45 2850.39 3103.94 2978.23 3105.68 2447.53
DESeq
batR. aegyptiacusTranscriptome 3748.87 3707.1 2690.82 2914.66 2980.74 3020.33 3540.68 3104.24 3037.11
DESeq
bat_genomeR. aegyptiacusGenome 3904.21 3021.9 2915.53 3903.52 3108.43 3165.62 3599.63 3158.3 3228.7

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2700.33 2988.45 2978.23 0.15 0.14 -0.0
7h 2854.6 2850.39 3105.68 -0.0 0.12 0.12
23h 2332.15 3103.94 2447.53 0.41 0.07 -0.34

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2700.33 2854.6 2332.15 0.08 -0.21 -0.29
Ebov 2988.45 2850.39 3103.94 -0.07 0.05 0.12
Marv 2978.23 3105.68 2447.53 0.06 -0.28 -0.34

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 3748.87 2914.66 3540.68 -0.36 -0.08 0.28
7h 3707.1 2980.74 3104.24 -0.31 -0.26 0.06
23h 2690.82 3020.33 3037.11 0.17 0.17 0.01

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 3748.87 3707.1 2690.82 -0.02 -0.48 -0.46
Ebov 2914.66 2980.74 3020.33 0.03 0.05 0.02
Marv 3540.68 3104.24 3037.11 -0.19 -0.22 -0.03