NUP93

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
NUP93	NIC96,KIAA0095	nucleoporin 93kDa	NM_014669	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The nucleoporin 93kDa is involved in RNA transport. It does not present any particular diffential expression pattern in the analyzed samples.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	187	248	244	221	276	247	294	385	172
Read_Max		R. aegyptiacus	Transcriptome	312	313	238	222	232	268	258	280	307
Read_Max		R. aegyptiacus	Genome	357	211	167	303	174	140	227	363	329
DESeq		H. sapiens	Genome	2700.33	2854.6	2332.15	2988.45	2850.39	3103.94	2978.23	3105.68	2447.53
DESeq		R. aegyptiacus	Transcriptome	3748.87	3707.1	2690.82	2914.66	2980.74	3020.33	3540.68	3104.24	3037.11
DESeq		R. aegyptiacus	Genome	3904.21	3021.9	2915.53	3903.52	3108.43	3165.62	3599.63	3158.3	3228.7

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	2700.33	2988.45	2978.23	0.15	0.14	-0.0
7h	2854.6	2850.39	3105.68	-0.0	0.12	0.12
23h	2332.15	3103.94	2447.53	0.41	0.07	-0.34

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	2700.33	2854.6	2332.15	0.08	-0.21	-0.29
Ebov	2988.45	2850.39	3103.94	-0.07	0.05	0.12
Marv	2978.23	3105.68	2447.53	0.06	-0.28	-0.34

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	3748.87	2914.66	3540.68	-0.36	-0.08	0.28
7h	3707.1	2980.74	3104.24	-0.31	-0.26	0.06
23h	2690.82	3020.33	3037.11	0.17	0.17	0.01

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	3748.87	3707.1	2690.82	-0.02	-0.48	-0.46
Ebov	2914.66	2980.74	3020.33	0.03	0.05	0.02
Marv	3540.68	3104.24	3037.11	-0.19	-0.22	-0.03