NUP98

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
NUP98	ADIR2, NUP196, NUP96,NUP96	nucleoporin 98kDa	NM_016320	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The nucleoporin 98kDa is involved in RNA transport and in Influenza A. It does not present any particular differential expression pattern in the samples analyzed.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	405	448	347	385	447	795	516	471	288
Read_Max		R. aegyptiacus	Transcriptome	350	235	218	234	223	267	199	284	255
Read_Max		R. aegyptiacus	Genome	370	294	182	243	192	157	172	335	286
DESeq		H. sapiens	Genome	8786.01	8877.97	7774.82	8896.05	8648.36	16011.83	8880.94	8921.75	7794.02
DESeq		R. aegyptiacus	Transcriptome	6223.92	5104.03	4817.52	5779.78	5573.91	6524.7	5082.47	5423.41	4940.48
DESeq		R. aegyptiacus	Genome	7707.87	6908.11	5659.22	6779.07	6860.87	8412.06	6507.67	6463.3	6033.58

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	8786.01	8896.05	8880.94	0.02	0.02	-0.0
7h	8877.97	8648.36	8921.75	-0.04	0.01	0.04
23h	7774.82	16011.83	7794.02	1.04	0.0	-1.04

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	8786.01	8877.97	7774.82	0.02	-0.18	-0.19
Ebov	8896.05	8648.36	16011.83	-0.04	0.85	0.89
Marv	8880.94	8921.75	7794.02	0.01	-0.19	-0.19

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	6223.92	5779.78	5082.47	-0.11	-0.29	-0.19
7h	5104.03	5573.91	5423.41	0.13	0.09	-0.04
23h	4817.52	6524.7	4940.48	0.44	0.04	-0.4

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	6223.92	5104.03	4817.52	-0.29	-0.37	-0.08
Ebov	5779.78	5573.91	6524.7	-0.05	0.17	0.23
Marv	5082.47	5423.41	4940.48	0.09	-0.04	-0.13