APC2

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
APC2	Adenomatosis Polyposis Coli 2,APCL	adenomatosis polyposis coli 2	NM_005883	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens adenomatosis polyposis coli 2 (APC2).

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	15	12	9	8	13	37	25	12	11
Read_Max		R. aegyptiacus	Transcriptome	8	5	6	7	3	5	4	4	7
Read_Max		R. aegyptiacus	Genome	10	5	5	8	5	5	4	9	9
DESeq		H. sapiens	Genome	242.52	182.54	184.67	167.54	147.33	260.24	159.77	177.66	177.15
DESeq		R. aegyptiacus	Transcriptome	22.84	24.6	36.42	43.12	30.57	24.1	25.47	28.26	35.11
DESeq		R. aegyptiacus	Genome	63.59	73.93	74.76	69.12	49.11	71.8	56.23	66.61	91.61

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	242.52	167.54	159.77	-0.53	-0.6	-0.07
7h	182.54	147.33	177.66	-0.31	-0.04	0.27
23h	184.67	260.24	177.15	0.49	-0.06	-0.55

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	242.52	182.54	184.67	-0.41	-0.39	0.02
Ebov	167.54	147.33	260.24	-0.19	0.64	0.82
Marv	159.77	177.66	177.15	0.15	0.15	-0.0

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	22.84	43.12	25.47	0.92	0.16	-0.76
7h	24.6	30.57	28.26	0.31	0.2	-0.11
23h	36.42	24.1	35.11	-0.6	-0.05	0.54

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	22.84	24.6	36.42	0.11	0.67	0.57
Ebov	43.12	30.57	24.1	-0.5	-0.84	-0.34
Marv	25.47	28.26	35.11	0.15	0.46	0.31