GRB10

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
GRB10 GRB-IR, Grb-10, IRBP, MEG1, RSS growth factor receptor-bound protein 10 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The growth factor receptor-bound protein 10 is an adapter protein which modulates coupling of a number of cell surface receptor kinases with specific signaling pathways. Binds to, and suppress signals from, activated receptors tyrosine kinases, including the insulin (INSR) and insulin-like growth factor (IGF1R) receptors. It does not present a particularly interesting differential expression pattern in the analyzed samples.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome58 97 99 61 119 123 91 135 83
Read_Max
batR. aegyptiacusTranscriptome 289 265 326 339 320 242 191 405 476
Read_Max
bat_genomeR. aegyptiacusGenome 358 467 488 303 320 171 240 595 684
DESeq
humanH. sapiensGenome 1472.44 2038.71 2128.62 1562.6 1936.64 1757.76 1582.6 1843.5 2363.8
DESeq
batR. aegyptiacusTranscriptome 1971.97 1800.04 3498.26 2474.22 2474.81 1572.9 1680.73 2368.91 2911.16
DESeq
bat_genomeR. aegyptiacusGenome 2520.59 3088.53 4161.85 2459.82 2989.01 2041.66 2193.96 2771.35 3539.5

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1472.44 1562.6 1582.6 0.09 0.1 0.02
7h 2038.71 1936.64 1843.5 -0.07 -0.15 -0.07
23h 2128.62 1757.76 2363.8 -0.28 0.15 0.43

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1472.44 2038.71 2128.62 0.47 0.53 0.06
Ebov 1562.6 1936.64 1757.76 0.31 0.17 -0.14
Marv 1582.6 1843.5 2363.8 0.22 0.58 0.36

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1971.97 2474.22 1680.73 0.33 -0.23 -0.56
7h 1800.04 2474.81 2368.91 0.46 0.4 -0.06
23h 3498.26 1572.9 2911.16 -1.15 -0.27 0.89

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1971.97 1800.04 3498.26 -0.13 0.83 0.96
Ebov 2474.22 2474.81 1572.9 0.0 -0.65 -0.65
Marv 1680.73 2368.91 2911.16 0.5 0.79 0.3