NUPL1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| NUPL1 | PRO2463,KIAA0410 | nucleoporin like 1 |  |
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NONE |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
The gene NUPL1 is expressed throughout human and bat datasets without significant changes in expression profiles. This gene encodes a member of the nucleoporin family that shares 87% sequence identity with rat nucleoporin p58. The protein is localized to the nuclear rim and is a component of the nuclear pore complex (NPC). All molecules entering or leaving the nucleus either diffuse through or are actively transported by the NPC. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. (provided by RefSeq, Jul 2008)
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 352 | 326 | 386 | 257 | 494 | 551 | 336 | 402 | 299 |
Read_Max |  | R. aegyptiacus | Transcriptome | 426 | 411 | 197 | 349 | 296 | 322 | 364 | 372 | 319 |
Read_Max |  | R. aegyptiacus | Genome | NA | NA | NA | NA | NA | NA | NA | NA | NA |
DESeq | | H. sapiens | Genome | 5988.24 | 5735.75 | 6267.71 | 5290.35 | 6255.84 | 8282.1 | 5358.97 | 5233.55 | 6108.63 |
DESeq | | R. aegyptiacus | Transcriptome | 3224.62 | 2974.59 | 1800.32 | 2650.94 | 2797.86 | 2609.71 | 3439.45 | 2572.99 | 2037.32 |
DESeq | | R. aegyptiacus | Genome | NA | NA | NA | NA | NA | NA | NA | NA | NA |