MAP2
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| MAP2 | MAP2A,MAP2B,MAP2C, MAP2B, MAP2C | microtubule-associated protein 2 | NM_001039538 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
The gene MAP2 is weakly expressed throughout human datasets without significant changes in expression levels. This gene encodes a protein that belongs to the microtubule-associated protein family. The proteins of this family are thought to be involved in microtubule assembly, which is an essential step in neurogenesis. The products of similar genes in rat and mouse are neuron-specific cytoskeletal proteins that are enriched in dentrites, implicating a role in determining and stabilizing dentritic shape during neuron development. A number of alternatively spliced variants encoding distinct isoforms have been described. (provided by RefSeq, Jan 2010)
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 22 | 17 | 11 | 17 | 31 | 50 | 18 | 30 | 78 |
Read_Max |  | R. aegyptiacus | Transcriptome | 2 | 3 | NA | NA | 3 | 2 | 2 | 2 | 2 |
Read_Max |  | R. aegyptiacus | Genome | 3 | 2 | 2 | 3 | 2 | 2 | 3 | 4 | 2 |
DESeq | | H. sapiens | Genome | 371.4 | 311.04 | 185.67 | 297.58 | 391.22 | 1036.63 | 343.11 | 506.99 | 2261.59 |
DESeq | | R. aegyptiacus | Transcriptome | 2.68 | 6.45 | 1.0 | 1.0 | 4.29 | 3.57 | 3.22 | 4.3 | 2.75 |
DESeq | | R. aegyptiacus | Genome | 7.73 | 10.95 | 10.04 | 11.85 | 14.51 | 2.61 | 7.87 | 13.48 | 10.27 |