PELI3

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
PELI3 MGC35521 pellino E3 ubiquitin protein ligase family member 3 NM_145065 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The gene PELI3 is weakly expressed in human and not expressed in bat.

The protein encoded by this gene is a scaffold protein and an intermediate signaling protein in the innate immune response pathway. The encoded protein helps transmit the immune response signal from Toll-like receptors to IRAK1/TRAF6 complexes. Several transcript variants encoding different isoforms have been found for this gene.(provided by RefSeq, Jul 2011)

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome18 20 21 15 17 18 28 29 23
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome 0 0 2 0 0 0 0 3 2
DESeq
humanH. sapiensGenome 239.47 287.58 260.13 273.62 240.01 247.08 295.74 317.54 285.88
DESeq
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
DESeq
bat_genomeR. aegyptiacusGenome 0.0 0.0 2.23 0.0 0.0 0.0 0.0 1.59 1.71

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 239.47 273.62 295.74 0.19 0.3 0.11
7h 287.58 240.01 317.54 -0.26 0.14 0.4
23h 260.13 247.08 285.88 -0.07 0.14 0.21

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 239.47 287.58 260.13 0.26 0.12 -0.14
Ebov 273.62 240.01 247.08 -0.19 -0.15 0.04
Marv 295.74 317.54 285.88 0.1 -0.05 -0.15

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h NA NA NA NA NA NA
7h NA NA NA NA NA NA
23h NA NA NA NA NA NA

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock NA NA NA NA NA NA
Ebov NA NA NA NA NA NA
Marv NA NA NA NA NA NA