NTRK2

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
NTRK2 BC075804, hCG_1985371, NM_001007097, NP_001007098, Q5VWE5, Q5VWE5_HUMAN, RP11-263K15.1-005,TRKB neurotrophic tyrosine kinase, receptor, type 2 pdf NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens neurotrophic tyrosine kinase, receptor, type 2 (NTRK2), transcript variant b gene encodes a member of the neurotrophic tyrosine receptor kinase (NTRK) family. This kinase is a membrane-bound receptor that, upon neurotrophin binding, phosphorylates itself and members of the MAPK pathway. Signalling through this kinase leads to cell differentiation. Mutations in this gene have been associated with obesity and mood disorders. Alternative splicing results in multiple transcript variants.

This gene shows no expression and no homolog was found in RAE.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome4 1 2 4 6 10 1 2 2
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome 2 0 0 2 0 0 2 1 0
DESeq
humanH. sapiensGenome 11.15 2.02 2.99 3.28 2.63 1.0 1.0 4.2 3.17
DESeq
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
DESeq
bat_genomeR. aegyptiacusGenome 1.72 0.0 0.0 1.97 0.0 0.0 2.25 2.38 0.0

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 11.15 3.28 1.0 -1.77 -3.48 -1.71
7h 2.02 2.63 4.2 0.38 1.06 0.68
23h 2.99 1.0 3.17 -1.58 0.08 1.66

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 11.15 2.02 2.99 -2.46 -1.9 0.57
Ebov 3.28 2.63 1.0 -0.32 -1.71 -1.4
Marv 1.0 4.2 3.17 2.07 1.66 -0.41

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h NA NA NA NA NA NA
7h NA NA NA NA NA NA
23h NA NA NA NA NA NA

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock NA NA NA NA NA NA
Ebov NA NA NA NA NA NA
Marv NA NA NA NA NA NA