ITGA2B

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
ITGA2B BDPLT16, BDPLT2, CD41, CD41B, GP2B, GPIIb, GT, GTA, HPA3, PPP1R93,CD41B integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41) pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41) gene is involved in the Rap1 and PI3K-Akt signaling pathway, Focal adhesion, ECM-receptor interaction, Platelet activation, Hematopoietic cell lineage, Regulation of actin cytoskeleton, Pathways in cancer, Small cell lung cancer and cardiomyopathy. It was not observed expression of this gene in the samples analyzed.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome0 2 2 2 2 3 2 2 2
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome 2 2 4 0 2 3 2 3 2
DESeq
humanH. sapiensGenome 1.0 8.14 17.88 5.56 5.06 8.9 7.14 2.6 7.52
DESeq
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
DESeq
bat_genomeR. aegyptiacusGenome 1.72 4.56 7.81 0.0 2.23 7.83 2.25 1.59 5.99

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1.0 5.56 7.14 2.48 2.84 0.36
7h 8.14 5.06 2.6 -0.69 -1.65 -0.96
23h 17.88 8.9 7.52 -1.01 -1.25 -0.24

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1.0 8.14 17.88 3.03 4.16 1.14
Ebov 5.56 5.06 8.9 -0.14 0.68 0.81
Marv 7.14 2.6 7.52 -1.46 0.07 1.53

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h NA NA NA NA NA NA
7h NA NA NA NA NA NA
23h NA NA NA NA NA NA

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock NA NA NA NA NA NA
Ebov NA NA NA NA NA NA
Marv NA NA NA NA NA NA