TIAM1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| TIAM1 | T-cell lymphoma invasion and metastasis 1 | NM_003253 |  |
NONE |  |
 |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
TIAM1 encodes for the T-cell lymphoma invasion and metastasis 1 protein. It modulates the activity of RHO-like proteins and connects extracellular signals to cytoskeletal activities. Acts as a GDP- dissociation stimulator protein that stimulates the GDP-GTP exchange activity of RHO-like GTPases and activates them. It activates RAC1, CDC42, and to a lesser extent RHOA. In human it is not expressed. In bat it is constantly expressed and sligthly downregulated in the mock probes.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 6 | 8 | 6 | 4 | 8 | 5 | 6 | 6 | 4 |
Read_Max |  | R. aegyptiacus | Transcriptome | 62 | 52 | 23 | 32 | 37 | 27 | 40 | 35 | 46 |
Read_Max |  | R. aegyptiacus | Genome | 66 | 45 | 16 | 48 | 30 | 21 | 34 | 44 | 54 |
DESeq | | H. sapiens | Genome | 1.0 | 1.0 | 3.98 | 4.42 | 2.63 | 1.0 | 2.75 | 1.0 | 5.35 |
DESeq | | R. aegyptiacus | Transcriptome | 1063.78 | 927.75 | 438.31 | 778.4 | 786.18 | 548.92 | 1028.86 | 724.76 | 629.04 |
DESeq | | R. aegyptiacus | Genome | 1435.18 | 1057.8 | 610.33 | 1303.48 | 1123.95 | 882.46 | 1501.25 | 1028.45 | 843.35 |