BLCAP
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| BLCAP | BC10 | bladder cancer associated protein | NM_006698 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene encodes a tumor suppressor protein that reduces cell growth by stimulating apoptosis. The first intron of this gene contains the neuronatin gene, which is imprinted and only expressed from the paternal allele. This gene is imprinted in brain where it is differentially expressed from different promoters. Transcription from the upstream promoter occurs preferentially on the maternal allele, and transcripts are preferentially expressed from the downstream promoter on the paternal allele. Alternative promoters and alternative splicing result in multiple transcript variants that encode the same protein
This gene shows a slight down regulation in the EBOV infected human cell sample 23h p.i..
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 65 | 119 | 64 | 104 | 112 | 54 | 101 | 127 | 90 |
Read_Max |  | R. aegyptiacus | Transcriptome | 147 | 111 | 74 | 69 | 72 | 91 | 57 | 96 | 96 |
Read_Max |  | R. aegyptiacus | Genome | 143 | 112 | 99 | 149 | 73 | 74 | 70 | 130 | 188 |
DESeq | | H. sapiens | Genome | 1031.01 | 1053.51 | 897.52 | 1005.94 | 865.98 | 580.01 | 922.94 | 868.3 | 992.66 |
DESeq | | R. aegyptiacus | Transcriptome | 232.88 | 206.14 | 202.55 | 132.86 | 180.59 | 175.51 | 144.5 | 157.98 | 180.32 |
DESeq | | R. aegyptiacus | Genome | 1005.49 | 907.21 | 1076.73 | 1061.54 | 885.09 | 1070.44 | 1009.83 | 945.19 | 1031.71 |