EREG

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
EREG EREG, epiregulin,ER epiregulin pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Epiregulin is a member of the epidermal growth factor family. Epiregulin can function as a ligand of EGFR (epidermal growth factor receptor), as well as a ligand of most members of the ERBB (v-erb-b2 oncogene homolog) family of tyrosine-kinase receptors.

Small upregulation in Ebola infected cells after 23 h in human cells. Also expression in bat cells but in nonoverlapping region with blat.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome6 2 1 3 3 23 8 2 3
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome 2 0 0 2 1 2 0 0 2
DESeq
humanH. sapiensGenome 32.46 6.1 1.99 16.97 10.76 222.07 41.35 8.19 15.14
DESeq
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
DESeq
bat_genomeR. aegyptiacusGenome 1.72 0.0 0.0 3.95 2.23 5.22 0.0 0.0 2.57

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 32.46 16.97 41.35 -0.94 0.35 1.28
7h 6.1 10.76 8.19 0.82 0.43 -0.39
23h 1.99 222.07 15.14 6.8 2.93 -3.87

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 32.46 6.1 1.99 -2.41 -4.03 -1.62
Ebov 16.97 10.76 222.07 -0.66 3.71 4.37
Marv 41.35 8.19 15.14 -2.34 -1.45 0.89

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h NA NA NA NA NA NA
7h NA NA NA NA NA NA
23h NA NA NA NA NA NA

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock NA NA NA NA NA NA
Ebov NA NA NA NA NA NA
Marv NA NA NA NA NA NA