MYCNOS

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
MYCNOS MYCN-AS1, N-CYM, NCYM, NYCM,NCYM, MYCN-AS1 MYCN opposite strand pdf NONE NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

This gene is located on the opposite strand of v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog (GeneID 4613). Transcription of this antisense gene may influence the progression of neuroblastoma by inhibiting transcription of v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog.

This gene is down-regulated in the Ebola infected cells in human cells after 23 h.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome23 71 73 37 57 2 49 75 27
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA
DESeq
humanH. sapiensGenome 138.0 329.4 424.94 196.06 254.64 3.63 190.48 288.77 86.9
DESeq
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
DESeq
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 138.0 196.06 190.48 0.51 0.46 -0.04
7h 329.4 254.64 288.77 -0.37 -0.19 0.18
23h 424.94 3.63 86.9 -6.87 -2.29 4.58

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 138.0 329.4 424.94 1.26 1.62 0.37
Ebov 196.06 254.64 3.63 0.38 -5.76 -6.13
Marv 190.48 288.77 86.9 0.6 -1.13 -1.73

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h NA NA NA NA NA NA
7h NA NA NA NA NA NA
23h NA NA NA NA NA NA

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock NA NA NA NA NA NA
Ebov NA NA NA NA NA NA
Marv NA NA NA NA NA NA