SYPL2

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
SYPL2 MG29,Mg29 synaptophysin-like 2 NM_001006603 pdf NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

SYPL2 encodes for the synaptophysin-like 2 protein. Involved incommunication between the T-tubular and junctional sarcoplasmic reticulummembranes.

It is not expressed in human cells and shows very weak expression in bat cells under allinvestigated conditions.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome2 4 1 0 2 10 1 2 1
Read_Max
batR. aegyptiacusTranscriptome 5 4 4 22 2 6 11 4 4
Read_Max
bat_genomeR. aegyptiacusGenome 6 4 4 5 2 4 3 5 6
DESeq
humanH. sapiensGenome 5.06 9.16 1.99 1.0 12.38 93.11 4.51 9.79 5.35
DESeq
batR. aegyptiacusTranscriptome 12.76 11.89 5.89 32.13 9.76 11.27 23.25 12.57 15.0
DESeq
bat_genomeR. aegyptiacusGenome 27.5 34.68 13.39 34.56 12.28 26.11 19.12 14.27 28.25

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 5.06 1.0 4.51 -2.34 -0.17 2.17
7h 9.16 12.38 9.79 0.43 0.1 -0.34
23h 1.99 93.11 5.35 5.55 1.43 -4.12

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 5.06 9.16 1.99 0.86 -1.35 -2.2
Ebov 1.0 12.38 93.11 3.63 6.54 2.91
Marv 4.51 9.79 5.35 1.12 0.25 -0.87

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 12.76 32.13 23.25 1.33 0.87 -0.47
7h 11.89 9.76 12.57 -0.28 0.08 0.37
23h 5.89 11.27 15.0 0.94 1.35 0.41

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 12.76 11.89 5.89 -0.1 -1.12 -1.01
Ebov 32.13 9.76 11.27 -1.72 -1.51 0.21
Marv 23.25 12.57 15.0 -0.89 -0.63 0.25