TFCP2L1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
TFCP2L1	LBP-9, CRTR1	transcription factor CP2-like 1	NM_014553	pdf		NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The transcription factor CP2-like 1 (TFCP2L1) gene is not expressed. Only in the probe of 23 h Marburg infected cells in human cells, a few reads mapped to the 5' part of the gene.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	6	2	4	4	4	5	6	3	8
Read_Max		R. aegyptiacus	Transcriptome	5	2	2	3	1	2	4	4	5
Read_Max		R. aegyptiacus	Genome	8	3	4	5	3	4	4	5	8
DESeq		H. sapiens	Genome	5.06	7.12	2.99	2.14	4.25	6.26	4.51	2.6	104.3
DESeq		R. aegyptiacus	Transcriptome	10.24	3.72	5.89	5.58	2.1	6.13	13.24	6.78	16.74
DESeq		R. aegyptiacus	Genome	33.52	11.86	24.55	21.72	26.79	37.86	25.86	17.44	56.51

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	5.06	2.14	4.51	-1.24	-0.17	1.08
7h	7.12	4.25	2.6	-0.74	-1.45	-0.71
23h	2.99	6.26	104.3	1.07	5.12	4.06

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	5.06	7.12	2.99	0.49	-0.76	-1.25
Ebov	2.14	4.25	6.26	0.99	1.55	0.56
Marv	4.51	2.6	104.3	-0.79	4.53	5.33

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	10.24	5.58	13.24	-0.88	0.37	1.25
7h	3.72	2.1	6.78	-0.82	0.87	1.69
23h	5.89	6.13	16.74	0.06	1.51	1.45

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	10.24	3.72	5.89	-1.46	-0.8	0.66
Ebov	5.58	2.1	6.13	-1.41	0.14	1.55
Marv	13.24	6.78	16.74	-0.97	0.34	1.3