SPATA21

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
SPATA21	Spermatogenesis Associated 21,spergen-2, spergen2	spermatogenesis associated 21	NM_198546	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens spermatogenesis associated 21 (SPATA21), mRNA.

Low expression in human cells and bat cells.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	3	2	2	2	2	8	2	2	2
Read_Max		R. aegyptiacus	Transcriptome	72	49	56	57	56	58	56	62	66
Read_Max		R. aegyptiacus	Genome	81	61	50	48	47	38	47	76	76
DESeq		H. sapiens	Genome	7.09	9.16	2.99	10.13	8.32	73.38	3.63	2.6	14.05
DESeq		R. aegyptiacus	Transcriptome	334.54	227.92	339.37	251.89	307.63	383.39	302.46	287.69	274.78
DESeq		R. aegyptiacus	Genome	878.3	740.19	840.18	799.86	917.46	1185.31	946.86	791.36	780.85

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	7.09	10.13	3.63	0.51	-0.97	-1.48
7h	9.16	8.32	2.6	-0.14	-1.82	-1.68
23h	2.99	73.38	14.05	4.62	2.23	-2.38

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	7.09	9.16	2.99	0.37	-1.25	-1.62
Ebov	10.13	8.32	73.38	-0.28	2.86	3.14
Marv	3.63	2.6	14.05	-0.48	1.95	2.43

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	334.54	251.89	302.46	-0.41	-0.15	0.26
7h	227.92	307.63	287.69	0.43	0.34	-0.1
23h	339.37	383.39	274.78	0.18	-0.3	-0.48

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	334.54	227.92	339.37	-0.55	0.02	0.57
Ebov	251.89	307.63	383.39	0.29	0.61	0.32
Marv	302.46	287.69	274.78	-0.07	-0.14	-0.07