BHLHE41
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| BHLHE41 | A2I2N8, BHE41_HUMAN, BHLHB3, DEC2, NM_030762, NP_110389, Q9C0J9, SHARP1, uc021qwg.1,DEC2, SHARP-1, bHLHe41 | basic helix-loop-helix family, member e41 | NM_030762 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene encodes a basic helix-loop-helix protein expressed in various tissues. The encoded protein can interact with ARNTL or compete for E-box binding sites in the promoter of PER1 and repress CLOCK/ARNTL's transactivation of PER1. This gene is believed to be involved in the control of circadian rhythm and cell differentiation. Defects in this gene are associated with the short sleep phenotype.
This gene is slightly expressed in Ebola and Marburg infected cells in human cells after 23 h. The other probes show no expression. In bat cells all probes are slightly expressed.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 4 | 3 | 2 | 3 | 4 | 19 | 3 | 8 | 12 |
Read_Max |  | R. aegyptiacus | Transcriptome | 35 | 18 | 28 | 30 | 24 | 48 | 19 | 28 | 37 |
Read_Max |  | R. aegyptiacus | Genome | 30 | 23 | 25 | 17 | 18 | 31 | 17 | 35 | 39 |
DESeq | | H. sapiens | Genome | 12.16 | 19.36 | 4.97 | 18.11 | 13.19 | 137.86 | 13.28 | 37.77 | 128.22 |
DESeq | | R. aegyptiacus | Transcriptome | 124.5 | 113.55 | 190.34 | 113.63 | 124.75 | 265.34 | 133.38 | 117.5 | 175.07 |
DESeq | | R. aegyptiacus | Genome | 210.55 | 209.0 | 353.7 | 201.45 | 247.78 | 613.54 | 211.41 | 231.54 | 282.54 |