SCN7A

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
SCN7A Nav2.1, Nav2.2, NaG sodium channel, voltage gated, type VII alpha subunit pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Mediates the voltage-dependent sodium ion permeability of excitable membranes. Very low to none expression. Only one exon present.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome23 34 22 21 52 58 26 42 39
Read_Max
batR. aegyptiacusTranscriptome NA NA 2 NA NA NA 3 NA NA
Read_Max
bat_genomeR. aegyptiacusGenome 5 2 2 5 2 2 3 4 2
DESeq
humanH. sapiensGenome 43.62 38.74 15.89 40.92 41.65 3.63 52.76 29.78 84.73
DESeq
batR. aegyptiacusTranscriptome 1.0 1.0 3.44 1.0 1.0 1.0 5.45 1.0 1.0
DESeq
bat_genomeR. aegyptiacusGenome 17.19 3.65 3.35 12.84 5.58 9.14 12.37 7.14 2.57

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 43.62 40.92 52.76 -0.09 0.27 0.37
7h 38.74 41.65 29.78 0.1 -0.38 -0.48
23h 15.89 3.63 84.73 -2.13 2.41 4.54

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 43.62 38.74 15.89 -0.17 -1.46 -1.29
Ebov 40.92 41.65 3.63 0.03 -3.49 -3.52
Marv 52.76 29.78 84.73 -0.83 0.68 1.51

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1.0 1.0 5.45 0.0 2.45 2.45
7h 1.0 1.0 1.0 0.0 0.0 0.0
23h 3.44 1.0 1.0 -1.78 -1.78 0.0

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1.0 1.0 3.44 0.0 1.78 1.78
Ebov 1.0 1.0 1.0 0.0 0.0 0.0
Marv 5.45 1.0 1.0 -2.45 -2.45 0.0