PSAPL1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
PSAPL1		prosaposin-like 1 (gene/pseudogene)		pdf		NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The prosaposin-like 1 (gene/pseudogene) (PSAPL1) is located in an intron of the sortilin-related VPS10 domain containing receptor 2 (SORCS2) gene.

The PSAPL1 is not expressed in the investigated cell lines.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	4	4	6	8	6	3	5	6	7
Read_Max		R. aegyptiacus	Transcriptome	NA	0	0	2	0	NA	NA	1	2
Read_Max		R. aegyptiacus	Genome	150	115	84	130	67	52	70	134	145
DESeq		H. sapiens	Genome	36.52	22.42	35.75	29.52	33.52	3.63	41.35	26.58	78.2
DESeq		R. aegyptiacus	Transcriptome	1.0	1.0	1.0	2.83	1.0	1.0	1.0	1.83	3.62
DESeq		R. aegyptiacus	Genome	4.3	8.21	22.32	8.89	8.93	1.31	4.5	5.55	5.14

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	36.52	29.52	41.35	-0.31	0.18	0.49
7h	22.42	33.52	26.58	0.58	0.25	-0.33
23h	35.75	3.63	78.2	-3.3	1.13	4.43

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	36.52	22.42	35.75	-0.7	-0.03	0.67
Ebov	29.52	33.52	3.63	0.18	-3.02	-3.21
Marv	41.35	26.58	78.2	-0.64	0.92	1.56

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1.0	2.83	1.0	1.5	0.0	-1.5
7h	1.0	1.0	1.83	0.0	0.87	0.87
23h	1.0	1.0	3.62	0.0	1.86	1.86

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1.0	1.0	1.0	0.0	0.0	0.0
Ebov	2.83	1.0	1.0	-1.5	-1.5	0.0
Marv	1.0	1.83	3.62	0.87	1.86	0.98