GEM

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
GEM	KIR	GTP binding protein overexpressed in skeletal muscle	NM_181702	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Gem was reported to be a potential regulatory protein, possibly participating in receptor-mediated signal transduction at the plasma membrane.

Nothing special for this gene both in human cells and bat cells. With very low expression.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	4	5	10	4	8	83	5	12	9
Read_Max		R. aegyptiacus	Transcriptome	2	4	2	NA	NA	1	1	NA	2
Read_Max		R. aegyptiacus	Genome	2	1	1	4	2	2	2	1	2
DESeq		H. sapiens	Genome	22.31	41.79	55.61	36.36	49.78	881.35	29.95	47.36	77.11
DESeq		R. aegyptiacus	Transcriptome	2.68	4.63	3.44	1.0	1.0	2.28	3.22	1.0	2.75
DESeq		R. aegyptiacus	Genome	8.59	0.91	2.23	6.91	8.93	3.92	13.49	0.79	1.71

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	22.31	36.36	29.95	0.7	0.42	-0.28
7h	41.79	49.78	47.36	0.25	0.18	-0.07
23h	55.61	881.35	77.11	3.99	0.47	-3.51

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	22.31	41.79	55.61	0.91	1.32	0.41
Ebov	36.36	49.78	881.35	0.45	4.6	4.15
Marv	29.95	47.36	77.11	0.66	1.36	0.7

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	2.68	1.0	3.22	-1.42	0.26	1.69
7h	4.63	1.0	1.0	-2.21	-2.21	0.0
23h	3.44	2.28	2.75	-0.59	-0.32	0.27

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	2.68	4.63	3.44	0.79	0.36	-0.43
Ebov	1.0	1.0	2.28	0.0	1.19	1.19
Marv	3.22	1.0	2.75	-1.69	-0.23	1.46