SLC40A1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
SLC40A1 MTP1, IREG1, FPN1, HFE4 solute carrier family 40 (iron-regulated transporter), member 1 pdf

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Description

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome562 560 500 717 755 179 995 1270 1770
Read_Max
batR. aegyptiacusTranscriptome 56 46 94 59 43 38 45 68 82
Read_Max
bat_genomeR. aegyptiacusGenome 69 85 127 69 66 25 46 103 142
DESeq
humanH. sapiensGenome 5923.3 4481.3 3941.52 6353.46 4577.91 1224.81 7560.75 6980.93 15254.3
DESeq
batR. aegyptiacusTranscriptome 386.62 350.46 924.48 493.63 513.5 239.67 423.71 515.73 477.72
DESeq
bat_genomeR. aegyptiacusGenome 500.17 622.45 1164.87 484.85 657.4 311.99 558.89 657.35 652.42

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 5923.3 6353.46 7560.75 0.1 0.35 0.25
7h 4481.3 4577.91 6980.93 0.03 0.64 0.61
23h 3941.52 1224.81 15254.3 -1.69 1.95 3.64

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 5923.3 4481.3 3941.52 -0.4 -0.59 -0.19
Ebov 6353.46 4577.91 1224.81 -0.47 -2.37 -1.9
Marv 7560.75 6980.93 15254.3 -0.12 1.01 1.13

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 386.62 493.63 423.71 0.35 0.13 -0.22
7h 350.46 513.5 515.73 0.55 0.56 0.01
23h 924.48 239.67 477.72 -1.95 -0.95 1.0

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 386.62 350.46 924.48 -0.14 1.26 1.4
Ebov 493.63 513.5 239.67 0.06 -1.04 -1.1
Marv 423.71 515.73 477.72 0.28 0.17 -0.11