PRR7

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
PRR7 MGC10772 proline rich 7 (synaptic) NM_030567 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Membrane protein. Not transcripts in the region but yes up- down-stream.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome5 8 4 4 7 15 8 5 3
Read_Max
batR. aegyptiacusTranscriptome 31 23 29 20 22 27 21 26 26
Read_Max
bat_genomeR. aegyptiacusGenome 29 24 19 23 19 14 15 32 28
DESeq
humanH. sapiensGenome 29.41 56.07 46.67 55.75 41.65 269.45 46.61 58.55 22.75
DESeq
batR. aegyptiacusTranscriptome 87.53 99.94 154.91 85.24 76.56 110.07 107.79 100.15 120.84
DESeq
bat_genomeR. aegyptiacusGenome 311.96 364.16 397.22 320.93 389.53 328.96 302.5 421.05 323.64

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 29.41 55.75 46.61 0.92 0.66 -0.26
7h 56.07 41.65 58.55 -0.43 0.06 0.49
23h 46.67 269.45 22.75 2.53 -1.04 -3.57

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 29.41 56.07 46.67 0.93 0.67 -0.26
Ebov 55.75 41.65 269.45 -0.42 2.27 2.69
Marv 46.61 58.55 22.75 0.33 -1.03 -1.36

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 87.53 85.24 107.79 -0.04 0.3 0.34
7h 99.94 76.56 100.15 -0.38 0.0 0.39
23h 154.91 110.07 120.84 -0.49 -0.36 0.13

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 87.53 99.94 154.91 0.19 0.82 0.63
Ebov 85.24 76.56 110.07 -0.15 0.37 0.52
Marv 107.79 100.15 120.84 -0.11 0.16 0.27