TMEM200A

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
TMEM200A KIAA1913,TTMC transmembrane protein 200A NM_052913 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The protein has a minor expression, which is equal in all samples.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome19 15 22 19 36 5 18 26 29
Read_Max
batR. aegyptiacusTranscriptome 51 38 22 31 24 25 30 29 40
Read_Max
bat_genomeR. aegyptiacusGenome 57 35 20 38 22 15 27 37 46
DESeq
humanH. sapiensGenome 178.59 131.54 187.65 169.82 187.17 31.27 180.83 132.09 319.59
DESeq
batR. aegyptiacusTranscriptome 308.49 232.46 184.23 205.19 203.59 188.34 247.95 205.07 223.18
DESeq
bat_genomeR. aegyptiacusGenome 403.05 282.93 255.51 339.69 285.73 271.53 341.86 287.84 302.24

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 178.59 169.82 180.83 -0.07 0.02 0.09
7h 131.54 187.17 132.09 0.51 0.01 -0.5
23h 187.65 31.27 319.59 -2.59 0.77 3.35

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 178.59 131.54 187.65 -0.44 0.07 0.51
Ebov 169.82 187.17 31.27 0.14 -2.44 -2.58
Marv 180.83 132.09 319.59 -0.45 0.82 1.27

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 308.49 205.19 247.95 -0.59 -0.32 0.27
7h 232.46 203.59 205.07 -0.19 -0.18 0.01
23h 184.23 188.34 223.18 0.03 0.28 0.24

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 308.49 232.46 184.23 -0.41 -0.74 -0.34
Ebov 205.19 203.59 188.34 -0.01 -0.12 -0.11
Marv 247.95 205.07 223.18 -0.27 -0.15 0.12