KLHL24

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
KLHL24	DRE1, FLJ20059	kelch-like family member 24	NM_017644	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The gene for the kelch-like family member 24 (KLHL24) is 5x upregulated within the 23 h probe. All other probes show equal expression.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	36	51	59	47	66	375	45	41	69
Read_Max		R. aegyptiacus	Transcriptome	60	53	79	63	42	77	41	48	45
Read_Max		R. aegyptiacus	Genome	69	85	66	51	37	58	36	72	60
DESeq		H. sapiens	Genome	1038.11	1061.67	1488.25	858.79	1256.2	7322.79	808.91	719.62	1814.69
DESeq		R. aegyptiacus	Transcriptome	440.39	283.29	729.04	486.3	432.47	728.56	351.41	455.41	310.65
DESeq		R. aegyptiacus	Genome	641.96	736.54	1018.71	501.64	602.71	1167.04	589.25	675.59	440.08

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1038.11	858.79	808.91	-0.27	-0.36	-0.09
7h	1061.67	1256.2	719.62	0.24	-0.56	-0.8
23h	1488.25	7322.79	1814.69	2.3	0.29	-2.01

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1038.11	1061.67	1488.25	0.03	0.52	0.49
Ebov	858.79	1256.2	7322.79	0.55	3.09	2.54
Marv	808.91	719.62	1814.69	-0.17	1.17	1.33

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	440.39	486.3	351.41	0.14	-0.33	-0.47
7h	283.29	432.47	455.41	0.61	0.68	0.07
23h	729.04	728.56	310.65	-0.0	-1.23	-1.23

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	440.39	283.29	729.04	-0.64	0.73	1.36
Ebov	486.3	432.47	728.56	-0.17	0.58	0.75
Marv	351.41	455.41	310.65	0.37	-0.18	-0.55