MYH4

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
MYH4 MYH2B, MyHC-2B, MyHC-IIb myosin, heavy chain 4, skeletal muscle NM_017533 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

This gene encodes for the myosin, heavy chain 4, skeletal muscle protein. Muscle myosin is a hexameric protein that consists of 2 heavy chain subunits (MHC), 2 alkali light chain subunits (MLC) and 2 regulatory light chain subunits.

It is constantly expressed in both human cells and bat cells under all investigated conditions. %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

\igvfigure{ \beginfigure[H] \centering \includegraphics[width=\textwidth]../../input/holy_folders/hg19.apg.00537/snapshots//hg19.apg.00537_igv.eps % \caption\igv of gene MYH4. % <- say something about the figure here \endfigure }

\sashimifigure{ \beginfigure[H] \centering \includegraphics[width=\textwidth]../../input/holy_folders/hg19.apg.00537/snapshots//hg19.apg.00537_sashimi.eps % \caption\sashimi of gene MYH4. % <- say something about the figure here \endfigure }

\ucscfigure{ \beginfigure[H] \centering \includegraphics[width=\textwidth]../../input/holy_folders/hg19.apg.00537/snapshots//hg19.apg.00537_ucsc.eps % \caption\ucsc of gene MYH4. % <- say something about the figure here \endfigure }

\setcounterfigure0 \enddocument

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome7 16 16 11 12 5 26 13 10
Read_Max
batR. aegyptiacusTranscriptome 56 30 67 37 26 32 22 34 94
Read_Max
bat_genomeR. aegyptiacusGenome 7 0 15 7 6 0 1 15 16
DESeq
humanH. sapiensGenome 84.21 84.63 78.44 147.01 79.04 18.11 117.67 64.95 115.17
DESeq
batR. aegyptiacusTranscriptome 756.29 509.31 1785.67 674.93 564.97 466.79 564.99 683.45 1355.05
DESeq
bat_genomeR. aegyptiacusGenome 5.16 0.0 15.62 6.91 4.46 0.0 1.12 5.55 7.71

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 84.21 147.01 117.67 0.8 0.48 -0.32
7h 84.63 79.04 64.95 -0.1 -0.38 -0.28
23h 78.44 18.11 115.17 -2.11 0.55 2.67

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 84.21 84.63 78.44 0.01 -0.1 -0.11
Ebov 147.01 79.04 18.11 -0.9 -3.02 -2.13
Marv 117.67 64.95 115.17 -0.86 -0.03 0.83

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 756.29 674.93 564.99 -0.16 -0.42 -0.26
7h 509.31 564.97 683.45 0.15 0.42 0.27
23h 1785.67 466.79 1355.05 -1.94 -0.4 1.54

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 756.29 509.31 1785.67 -0.57 1.24 1.81
Ebov 674.93 564.97 466.79 -0.26 -0.53 -0.28
Marv 564.99 683.45 1355.05 0.27 1.26 0.99