CSRNP1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| CSRNP1 | FAM130B, TAIP-3, URAX1,URAX1, DKFZp566F164, FAM130B | cysteine-serine-rich nuclear protein 1 | NM_033027 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene encodes a protein that localizes to the nucleus and expression of this gene is induced in response to elevated levels of axin. The Wnt signalling pathway, which is negatively regulated by axin, is important in axis formation in early development and impaired regulation of this signalling pathway is often involved in tumors.
This gene is found to be up-regulated in human cells by Ebola (23 h) but not in bat cells.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 62 | 53 | 48 | 39 | 74 | 437 | 58 | 73 | 59 |
Read_Max |  | R. aegyptiacus | Transcriptome | 52 | 34 | 53 | 57 | 70 | 68 | 47 | 89 | 103 |
Read_Max |  | R. aegyptiacus | Genome | 58 | 56 | 48 | 31 | 56 | 37 | 42 | 107 | 116 |
DESeq | | H. sapiens | Genome | 1022.89 | 942.34 | 875.68 | 788.07 | 837.53 | 6542.45 | 864.17 | 924.25 | 1000.27 |
DESeq | | R. aegyptiacus | Transcriptome | 227.0 | 220.66 | 261.19 | 301.34 | 342.67 | 321.8 | 222.37 | 288.52 | 383.25 |
DESeq | | R. aegyptiacus | Genome | 556.88 | 590.51 | 608.1 | 549.04 | 763.44 | 742.78 | 531.9 | 681.14 | 867.32 |