CDH1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
CDH1	Cadherin 1, E-Cadherin, UVO,uvomorulin, CD324	cadherin 1, type 1, E-cadherin (epithelial)	NM_004360	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens cadherin 1, type 1, E-cadherin (epithelial) (CDH1)

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	181	166	148	146	244	67	217	224	331
Read_Max		R. aegyptiacus	Transcriptome	32	23	9	18	23	14	20	15	29
Read_Max		R. aegyptiacus	Genome	33	14	9	23	14	11	19	21	32
DESeq		H. sapiens	Genome	3634.95	3271.73	2623.05	3833.7	3191.02	872.14	3676.49	3198.4	7151.39
DESeq		R. aegyptiacus	Transcriptome	337.06	275.12	110.94	116.37	136.79	183.21	249.07	152.2	201.31
DESeq		R. aegyptiacus	Genome	412.51	174.32	203.07	364.38	196.44	265.0	342.98	218.85	293.67

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	3634.95	3833.7	3676.49	0.08	0.02	-0.06
7h	3271.73	3191.02	3198.4	-0.04	-0.03	0.0
23h	2623.05	872.14	7151.39	-1.59	1.45	3.04

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	3634.95	3271.73	2623.05	-0.15	-0.47	-0.32
Ebov	3833.7	3191.02	872.14	-0.26	-2.14	-1.87
Marv	3676.49	3198.4	7151.39	-0.2	0.96	1.16

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	337.06	116.37	249.07	-1.53	-0.44	1.1
7h	275.12	136.79	152.2	-1.01	-0.85	0.15
23h	110.94	183.21	201.31	0.72	0.86	0.14

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	337.06	275.12	110.94	-0.29	-1.6	-1.31
Ebov	116.37	136.79	183.21	0.23	0.65	0.42
Marv	249.07	152.2	201.31	-0.71	-0.31	0.4