PCYOX1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
PCYOX1 PCL1,KIAA0908, PCL1 prenylcysteine oxidase 1 NM_016297 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Prenylcysteine is released during the degradation of prenylated proteins. PCYOX1 catalyzes the degradation of prenylcysteine to yield free cysteines and a hydrophobic isoprenoid product~\citetschantz99cloning.(supplied by OMIM, Mar 2008)

The gene PCYOX1 is expressed throughout human cells datasets without significant changes.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome600 612 643 577 732 406 654 741 431
Read_Max
batR. aegyptiacusTranscriptome 363 328 225 301 226 271 261 304 244
Read_Max
bat_genomeR. aegyptiacusGenome 404 313 189 320 191 161 228 378 281
DESeq
humanH. sapiensGenome 10799.35 10124.26 12033.04 10044.71 9725.52 2913.14 9823.94 8904.96 8413.8
DESeq
batR. aegyptiacusTranscriptome 2397.08 2351.92 2121.59 2244.39 2155.04 1977.1 2332.6 2125.18 1802.9
DESeq
bat_genomeR. aegyptiacusGenome 3839.75 3808.63 3134.22 3844.27 3659.8 3370.57 4025.82 3658.65 2981.26

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 10799.35 10044.71 9823.94 -0.1 -0.14 -0.03
7h 10124.26 9725.52 8904.96 -0.06 -0.19 -0.13
23h 12033.04 2913.14 8413.8 -2.05 -0.52 1.53

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 10799.35 10124.26 12033.04 -0.09 0.16 0.25
Ebov 10044.71 9725.52 2913.14 -0.05 -1.79 -1.74
Marv 9823.94 8904.96 8413.8 -0.14 -0.22 -0.08

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2397.08 2244.39 2332.6 -0.09 -0.04 0.06
7h 2351.92 2155.04 2125.18 -0.13 -0.15 -0.02
23h 2121.59 1977.1 1802.9 -0.1 -0.23 -0.13

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2397.08 2351.92 2121.59 -0.03 -0.18 -0.15
Ebov 2244.39 2155.04 1977.1 -0.06 -0.18 -0.12
Marv 2332.6 2125.18 1802.9 -0.13 -0.37 -0.24